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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "plmmr" in publications use:'
type: software
license: GPL-3.0-only
title: 'plmmr: Penalized Linear Mixed Models for Correlated Data'
version: 4.1.0.0
identifiers:
- type: doi
  value: 10.32614/CRAN.package.plmmr
abstract: Fits penalized linear mixed models that correct for unobserved confounding
  factors. 'plmmr' infers and corrects for the presence of unobserved confounding
  effects such as population stratification and environmental heterogeneity. It then
  fits a linear model via penalized maximum likelihood. Originally designed for the
  multivariate analysis of single nucleotide polymorphisms (SNPs) measured in a genome-wide
  association study (GWAS), 'plmmr' eliminates the need for subpopulation-specific
  analyses and post-analysis p-value adjustments. Functions for the appropriate processing
  of 'PLINK' files are also supplied. For examples, see the package homepage. <https://pbreheny.github.io/plmmr/>.
authors:
- family-names: Peter
  given-names: Tabitha K.
  email: tabitha-peter@uiowa.edu
  orcid: https://orcid.org/0009-0005-2524-4751
- family-names: Reisetter
  given-names: Anna C.
  email: anna-reisetter@uiowa.edu
  orcid: https://orcid.org/0000-0001-8332-4585
- family-names: Breheny
  given-names: Patrick J.
  email: patrick-breheny@uiowa.edu
  orcid: https://orcid.org/0000-0002-0650-1119
- family-names: Lu
  given-names: Yujing
preferred-citation:
  type: article
  title: Penalized linear mixed models for structured genetic data
  authors:
  - family-names: Reisetter
    given-names: Anna C.
    email: anna-reisetter@uiowa.edu
    orcid: https://orcid.org/0000-0001-8332-4585
  - family-names: Breheny
    given-names: Patrick
  journal: Genetic epidemiology
  year: '2021'
  volume: '45'
  issue: '5'
  url: https://doi.org/10.1002/gepi.22384
  start: '427'
  end: '444'
repository: https://pbreheny.r-universe.dev
repository-code: https://github.com/pbreheny/plmmr/
commit: 37adf53812b5b9a3069d4143ee278ad21aea2f59
url: https://pbreheny.github.io/plmmr/
date-released: '2024-10-05'
contact:
- family-names: Breheny
  given-names: Patrick J.
  email: patrick-breheny@uiowa.edu
  orcid: https://orcid.org/0000-0002-0650-1119